STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mbur_0497Iron complex/Vitamin B12 ABC transporter permease protein; Evidence code ER3. (354 aa)    
Predicted Functional Partners:
Mbur_0496
Iron complex/Vitamin B12 ABC transporter ATPase subunit; Evidence code ER3.
 
 
 0.982
Mbur_1547
Iron complex/Vitamin B12 ABC transporter substrate binding protein; Evidence code ER3.
 
 
 0.936
Mbur_1545
Iron complex/Vitamin B12 ABC transporter ATPase subunit; Evidence code ER3.
 
 
 0.916
Mbur_1095
Iron complex/Vitamin B12 ABC transporter ATPase subunit; Evidence code ER3.
 
 
 0.900
Mbur_1093
Iron complex/Vitamin B12 ABC transporter substrate binding protein; Evidence code ER3.
 
 
 0.880
Mbur_1049
Iron complex/Vitamin B12 ABC transporter ATPase subunit; Evidence code ER3.
 
 
 0.856
Mbur_0500
Iron complex/Vitamin B12 ABC transporter substrate binding protein; Evidence code ER3.
 
     0.854
Mbur_1047
Iron complex/Vitamin B12 ABC transporter substrate binding protein; Evidence code ER3.
 
 
 0.805
Mbur_0498
Fe-S protein, radical SAM family; Evidence code ER4.
     
 0.705
Mbur_0499
Methyltransferase; Evidence code ER4.
       0.684
Your Current Organism:
Methanococcoides burtonii
NCBI taxonomy Id: 259564
Other names: M. burtonii DSM 6242, Methanococcoides burtonii DSM 6242, Methanococcoides burtonii str. DSM 6242
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.