STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mbur_0715Protein containing DUF1616 and fibronectin type III-like domains; Evidence code ER4. (774 aa)    
Predicted Functional Partners:
Mbur_2032
Protein of unknown function DUF457; Evidence code ER4.
 
     0.635
Mbur_2009
CAAX-amino-terminal protease family protein; Evidence code ER4.
 
    0.582
Mbur_1034
Hypothetical protein; Evidence code ER5.
  
     0.525
Mbur_2020
Hypothetical protein; Evidence code ER5.
 
     0.501
Mbur_2387
Hypothetical protein; Evidence code ER5.
  
     0.496
Mbur_0231
Transcriptional regulator, ArsR family protein; Evidence code ER4.
  
     0.484
Mbur_0370
NMD3 family protein; Evidence code ER4.
  
     0.476
Mbur_1882
Protein of unknown function UPF0153; Evidence code ER4.
  
    0.475
Mbur_1772
tRNA-guanine transglycosylase; Evidence code ER3.
 
     0.474
Mbur_1895
Uncharacterised conserved Zn-finger protein UCP015877; Evidence code ER4.
  
     0.474
Your Current Organism:
Methanococcoides burtonii
NCBI taxonomy Id: 259564
Other names: M. burtonii DSM 6242, Methanococcoides burtonii DSM 6242, Methanococcoides burtonii str. DSM 6242
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