Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mbur_0804MoxR-like AAA-3 family ATPase; Evidence code ER3. (324 aa)    
Predicted Functional Partners:
Mbur_0803
Protein of unknown function DUF58; Evidence code ER3.
 
  
 0.984
Mbur_0801
Hypothetical protein; Evidence code ER5.
 
     0.931
Mbur_0802
Von Willebrand factor-domain membrane protein; Evidence code ER4.
 
     0.925
Mbur_0805
Hypothetical protein; Evidence code ER5.
       0.873
Mbur_0806
Prephenate dehydratase; Evidence code ER2.
       0.830
Mbur_1492
Hypothetical protein with von Willebrand factor type A domain and Invasin domain; Evidence code ER4.
 
  
 0.675
Mbur_1186
Diphosphomevalonate decarboxylase; Evidence code ER4.
   
    0.533
Mbur_1981
Hypothetical protein; Evidence code ER5.
       0.497
Mbur_0716
Zn-dependent protease family protein; Evidence code ER4.
  
  
 0.402
htpX
Peptidase, M48 family; Evidence code ER4; Belongs to the peptidase M48B family.
  
  
 0.402
Your Current Organism:
Methanococcoides burtonii
NCBI taxonomy Id: 259564
Other names: M. burtonii DSM 6242, Methanococcoides burtonii DSM 6242, Methanococcoides burtonii str. DSM 6242
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