Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Mbur_1204 | Mbur_1205 | Cytosine deaminase; Evidence code ER2. | Peptidase U32 family protein; Evidence code ER4. | 0.583 |
Mbur_1204 | Mbur_1206 | Cytosine deaminase; Evidence code ER2. | AraC_E_bind-containing bacterial regulation effector protein; Evidence code ER4. | 0.489 |
Mbur_1205 | Mbur_1204 | Peptidase U32 family protein; Evidence code ER4. | Cytosine deaminase; Evidence code ER2. | 0.583 |
Mbur_1205 | Mbur_1206 | Peptidase U32 family protein; Evidence code ER4. | AraC_E_bind-containing bacterial regulation effector protein; Evidence code ER4. | 0.559 |
Mbur_1206 | Mbur_1204 | AraC_E_bind-containing bacterial regulation effector protein; Evidence code ER4. | Cytosine deaminase; Evidence code ER2. | 0.489 |
Mbur_1206 | Mbur_1205 | AraC_E_bind-containing bacterial regulation effector protein; Evidence code ER4. | Peptidase U32 family protein; Evidence code ER4. | 0.559 |