Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mbur_1477 | Mbur_1871 | Mbur_1477 | Mbur_1871 | Iron dependent repressor; Evidence code ER3. | Iron dependent repressor; Evidence code ER3. | 0.442 |
Mbur_1871 | Mbur_1477 | Mbur_1871 | Mbur_1477 | Iron dependent repressor; Evidence code ER3. | Iron dependent repressor; Evidence code ER3. | 0.442 |
Mbur_1871 | Mbur_1872 | Mbur_1871 | Mbur_1872 | Iron dependent repressor; Evidence code ER3. | Ferrous iron transport protein B; Evidence code ER3. | 0.837 |
Mbur_1871 | Mbur_1873 | Mbur_1871 | Mbur_1873 | Iron dependent repressor; Evidence code ER3. | Hypothetical protein; Evidence code ER5. | 0.566 |
Mbur_1871 | pdaD | Mbur_1871 | Mbur_1870 | Iron dependent repressor; Evidence code ER3. | Pyruvoyl-dependent arginine decarboxylase; Evidence code ER3; Belongs to the PdaD family. | 0.591 |
Mbur_1872 | Mbur_1871 | Mbur_1872 | Mbur_1871 | Ferrous iron transport protein B; Evidence code ER3. | Iron dependent repressor; Evidence code ER3. | 0.837 |
Mbur_1872 | Mbur_1873 | Mbur_1872 | Mbur_1873 | Ferrous iron transport protein B; Evidence code ER3. | Hypothetical protein; Evidence code ER5. | 0.572 |
Mbur_1872 | pdaD | Mbur_1872 | Mbur_1870 | Ferrous iron transport protein B; Evidence code ER3. | Pyruvoyl-dependent arginine decarboxylase; Evidence code ER3; Belongs to the PdaD family. | 0.529 |
Mbur_1873 | Mbur_1871 | Mbur_1873 | Mbur_1871 | Hypothetical protein; Evidence code ER5. | Iron dependent repressor; Evidence code ER3. | 0.566 |
Mbur_1873 | Mbur_1872 | Mbur_1873 | Mbur_1872 | Hypothetical protein; Evidence code ER5. | Ferrous iron transport protein B; Evidence code ER3. | 0.572 |
Mbur_1873 | pdaD | Mbur_1873 | Mbur_1870 | Hypothetical protein; Evidence code ER5. | Pyruvoyl-dependent arginine decarboxylase; Evidence code ER3; Belongs to the PdaD family. | 0.402 |
pdaD | Mbur_1871 | Mbur_1870 | Mbur_1871 | Pyruvoyl-dependent arginine decarboxylase; Evidence code ER3; Belongs to the PdaD family. | Iron dependent repressor; Evidence code ER3. | 0.591 |
pdaD | Mbur_1872 | Mbur_1870 | Mbur_1872 | Pyruvoyl-dependent arginine decarboxylase; Evidence code ER3; Belongs to the PdaD family. | Ferrous iron transport protein B; Evidence code ER3. | 0.529 |
pdaD | Mbur_1873 | Mbur_1870 | Mbur_1873 | Pyruvoyl-dependent arginine decarboxylase; Evidence code ER3; Belongs to the PdaD family. | Hypothetical protein; Evidence code ER5. | 0.402 |