STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mbur_2333Fumarylacetoacetate hydrolase domain-containing protein; Evidence code ER4. (245 aa)    
Predicted Functional Partners:
Mbur_2334
Hypothetical protein; Evidence code ER5.
       0.800
gltX
Glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
  
  
 0.721
Mbur_1595
2-dehydro-3-deoxyglucarate aldolase; Evidence code ER3.
  
  
 0.606
Mbur_0175
NAD-dependent aldehyde dehydrogenase; Evidence code ER2.
  
 
 0.551
Mbur_1940
NAD dependent Aldehyde dehydrogenase; Evidence code ER3.
  
 
 0.551
acnB
Aconitate hydratase 2; Evidence code ER2.
  
  
 0.540
ubiE
Menaquinone biosynthesis methyltransferase; Evidence code ER3.
       0.537
Mbur_1060
Hypothetical protein; Evidence code ER5.
  
  
 0.535
Mbur_1973
Glutamate dehydrogenase; Evidence code ER2; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.533
Mbur_1562
Pre-mRNA processing ribonucleoprotein; Evidence code ER3.
      0.527
Your Current Organism:
Methanococcoides burtonii
NCBI taxonomy Id: 259564
Other names: M. burtonii DSM 6242, Methanococcoides burtonii DSM 6242, Methanococcoides burtonii str. DSM 6242
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