STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW47086.1NTE family protein. (393 aa)    
Predicted Functional Partners:
SCW75540.1
Polyhydroxyalkanoate synthase.
 
   
 0.672
SCW32090.1
Polyhydroxyalkanoate synthase.
 
   
 0.648
SCW47100.1
Hypothetical protein.
       0.586
SCW39776.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
 
      0.554
SCW85112.1
Poly(3-hydroxybutyrate) depolymerase.
  
     0.547
SCW47069.1
Hypothetical protein.
       0.512
SCW72389.1
3-hydroxybutyrate dehydrogenase.
 
  
  0.500
SCW46102.1
Polyhydroxyalkanoate synthesis repressor PhaR.
 
     0.461
SCW47117.1
Sel1 repeat-containing protein.
       0.412
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
 
    0.401
Your Current Organism:
Asticcacaulis taihuensis
NCBI taxonomy Id: 260084
Other names: A. taihuensis, AS 1.3431, Asticcacaulis sp. T3-B7, Asticcacaulis taihuensis Liu et al. 2005, JCM 12463, strain T3-B7
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