STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW48700.1Putative membrane protein. (199 aa)    
Predicted Functional Partners:
SCW40995.1
Hemerythrin HHE cation binding domain-containing protein.
   
    0.623
SCW78032.1
DNA topoisomerase-1.
 
     0.577
SCW39173.1
Hypothetical protein.
  
     0.450
SCW80612.1
Protein of unknown function.
  
     0.440
SCW80660.1
Hypothetical protein.
  
     0.411
Your Current Organism:
Asticcacaulis taihuensis
NCBI taxonomy Id: 260084
Other names: A. taihuensis, AS 1.3431, Asticcacaulis sp. T3-B7, Asticcacaulis taihuensis Liu et al. 2005, JCM 12463, strain T3-B7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.