STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW66052.1Beta-galactosidase GanA. (560 aa)    
Predicted Functional Partners:
SCW66044.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
 
 
  0.805
SCW41674.1
Carboxypeptidase C (cathepsin A).
    
  0.699
SCW52898.1
Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
 
     0.669
SCW32426.1
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.665
SCW55762.1
TonB-dependent receptor.
  
     0.658
SCW67894.1
TonB-dependent receptor.
  
     0.655
SCW78879.1
Protein of unknown function.
  
    0.636
SCW71870.1
Ankyrin repeat-containing protein.
   
 
  0.624
SCW80343.1
Ankyrin repeat-containing protein.
   
 
  0.624
SCW47999.1
TonB-dependent receptor.
  
     0.616
Your Current Organism:
Asticcacaulis taihuensis
NCBI taxonomy Id: 260084
Other names: A. taihuensis, AS 1.3431, Asticcacaulis sp. T3-B7, Asticcacaulis taihuensis Liu et al. 2005, JCM 12463, strain T3-B7
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