STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW66155.1Hypothetical protein. (306 aa)    
Predicted Functional Partners:
SCW66161.1
Oxidoreductase family, C-terminal alpha/beta domain.
       0.741
SCW66136.1
Plasmid stabilization system protein ParE; Manually curated.
       0.532
SCW66146.1
Antitoxin ParD.
       0.532
SCW72875.1
Amidohydrolase.
    
 0.520
SCW77871.1
Dioxygenase.
     
 0.490
SCW34195.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
    
  0.483
SCW29867.1
Cu+-exporting ATPase.
    
  0.470
SCW35405.1
Cu+-exporting ATPase.
    
  0.470
SCW44403.1
4-hydroxyphenylpyruvate dioxygenase.
     
 0.462
Your Current Organism:
Asticcacaulis taihuensis
NCBI taxonomy Id: 260084
Other names: A. taihuensis, AS 1.3431, Asticcacaulis sp. T3-B7, Asticcacaulis taihuensis Liu et al. 2005, JCM 12463, strain T3-B7
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