Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW57109.1 | SCW64170.1 | SAMN02927928_1998 | SAMN02927928_2430 | Glutamate synthase (NADPH/NADH) large chain. | Tetratricopeptide repeat-containing protein. | 0.507 |
SCW57109.1 | SCW64181.1 | SAMN02927928_1998 | SAMN02927928_2431 | Glutamate synthase (NADPH/NADH) large chain. | Tetratricopeptide repeat-containing protein. | 0.507 |
SCW57109.1 | SCW67307.1 | SAMN02927928_1998 | SAMN02927928_2600 | Glutamate synthase (NADPH/NADH) large chain. | Glycosyl transferases group 1. | 0.420 |
SCW57109.1 | SCW67491.1 | SAMN02927928_1998 | SAMN02927928_2616 | Glutamate synthase (NADPH/NADH) large chain. | D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase. | 0.452 |
SCW57109.1 | cysD | SAMN02927928_1998 | SAMN02927928_2601 | Glutamate synthase (NADPH/NADH) large chain. | Sulfate adenylyltransferase subunit 2. | 0.477 |
SCW57109.1 | cysN | SAMN02927928_1998 | SAMN02927928_2602 | Glutamate synthase (NADPH/NADH) large chain. | Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.599 |
SCW57109.1 | polA | SAMN02927928_1998 | SAMN02927928_3215 | Glutamate synthase (NADPH/NADH) large chain. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.492 |
SCW63678.1 | SCW64170.1 | SAMN02927928_2392 | SAMN02927928_2430 | Undecaprenyl-phosphate glucose phosphotransferase. | Tetratricopeptide repeat-containing protein. | 0.569 |
SCW63678.1 | SCW64181.1 | SAMN02927928_2392 | SAMN02927928_2431 | Undecaprenyl-phosphate glucose phosphotransferase. | Tetratricopeptide repeat-containing protein. | 0.569 |
SCW63678.1 | SCW67307.1 | SAMN02927928_2392 | SAMN02927928_2600 | Undecaprenyl-phosphate glucose phosphotransferase. | Glycosyl transferases group 1. | 0.468 |
SCW63678.1 | SCW67491.1 | SAMN02927928_2392 | SAMN02927928_2616 | Undecaprenyl-phosphate glucose phosphotransferase. | D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase. | 0.675 |
SCW64170.1 | SCW57109.1 | SAMN02927928_2430 | SAMN02927928_1998 | Tetratricopeptide repeat-containing protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.507 |
SCW64170.1 | SCW63678.1 | SAMN02927928_2430 | SAMN02927928_2392 | Tetratricopeptide repeat-containing protein. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.569 |
SCW64170.1 | SCW64181.1 | SAMN02927928_2430 | SAMN02927928_2431 | Tetratricopeptide repeat-containing protein. | Tetratricopeptide repeat-containing protein. | 0.985 |
SCW64170.1 | SCW67307.1 | SAMN02927928_2430 | SAMN02927928_2600 | Tetratricopeptide repeat-containing protein. | Glycosyl transferases group 1. | 0.507 |
SCW64170.1 | SCW67491.1 | SAMN02927928_2430 | SAMN02927928_2616 | Tetratricopeptide repeat-containing protein. | D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase. | 0.644 |
SCW64170.1 | polA | SAMN02927928_2430 | SAMN02927928_3215 | Tetratricopeptide repeat-containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.769 |
SCW64181.1 | SCW57109.1 | SAMN02927928_2431 | SAMN02927928_1998 | Tetratricopeptide repeat-containing protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.507 |
SCW64181.1 | SCW63678.1 | SAMN02927928_2431 | SAMN02927928_2392 | Tetratricopeptide repeat-containing protein. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.569 |
SCW64181.1 | SCW64170.1 | SAMN02927928_2431 | SAMN02927928_2430 | Tetratricopeptide repeat-containing protein. | Tetratricopeptide repeat-containing protein. | 0.985 |
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