STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW72129.1Uncharacterized SAM-binding protein YcdF, DUF218 family. (220 aa)    
Predicted Functional Partners:
SCW72118.1
Cell division transport system permease protein.
 
     0.885
SCW72137.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.825
SCW72147.1
Hypothetical protein.
       0.773
SCW72110.1
Cell division transport system ATP-binding protein.
       0.733
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.682
SCW33868.1
Uncharacterized metal-binding protein YceD, DUF177 family.
  
     0.666
SCW49062.1
Cell division protein ZapA.
  
     0.658
SCW74707.1
Putative endonuclease; Belongs to the UPF0102 family.
  
     0.649
SCW83956.1
Transcriptional regulator, MucR family.
  
     0.644
SCW30901.1
DNA polymerase III, chi subunit.
 
     0.628
Your Current Organism:
Asticcacaulis taihuensis
NCBI taxonomy Id: 260084
Other names: A. taihuensis, AS 1.3431, Asticcacaulis sp. T3-B7, Asticcacaulis taihuensis Liu et al. 2005, JCM 12463, strain T3-B7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.