Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW41239.1 | SCW46074.1 | SAMN02927928_1033 | SAMN02927928_1389 | 3-hydroxybutyryl-CoA dehydratase. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.692 |
SCW41239.1 | SCW66455.1 | SAMN02927928_1033 | SAMN02927928_2528 | 3-hydroxybutyryl-CoA dehydratase. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.964 |
SCW41239.1 | SCW66816.1 | SAMN02927928_1033 | SAMN02927928_2557 | 3-hydroxybutyryl-CoA dehydratase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.625 |
SCW41239.1 | SCW75540.1 | SAMN02927928_1033 | SAMN02927928_3178 | 3-hydroxybutyryl-CoA dehydratase. | Polyhydroxyalkanoate synthase. | 0.936 |
SCW41239.1 | SCW75546.1 | SAMN02927928_1033 | SAMN02927928_3179 | 3-hydroxybutyryl-CoA dehydratase. | Phosphotransacetylase. | 0.948 |
SCW41239.1 | ackA | SAMN02927928_1033 | SAMN02927928_3180 | 3-hydroxybutyryl-CoA dehydratase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.509 |
SCW46074.1 | SCW41239.1 | SAMN02927928_1389 | SAMN02927928_1033 | 3-oxoacyl-[acyl-carrier-protein] reductase. | 3-hydroxybutyryl-CoA dehydratase. | 0.692 |
SCW46074.1 | SCW66455.1 | SAMN02927928_1389 | SAMN02927928_2528 | 3-oxoacyl-[acyl-carrier-protein] reductase. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.708 |
SCW46074.1 | SCW75540.1 | SAMN02927928_1389 | SAMN02927928_3178 | 3-oxoacyl-[acyl-carrier-protein] reductase. | Polyhydroxyalkanoate synthase. | 0.788 |
SCW46102.1 | SCW47086.1 | SAMN02927928_1391 | SAMN02927928_1457 | Polyhydroxyalkanoate synthesis repressor PhaR. | NTE family protein. | 0.461 |
SCW46102.1 | SCW75540.1 | SAMN02927928_1391 | SAMN02927928_3178 | Polyhydroxyalkanoate synthesis repressor PhaR. | Polyhydroxyalkanoate synthase. | 0.814 |
SCW46102.1 | SCW85112.1 | SAMN02927928_1391 | SAMN02927928_0204 | Polyhydroxyalkanoate synthesis repressor PhaR. | Poly(3-hydroxybutyrate) depolymerase. | 0.655 |
SCW47086.1 | SCW46102.1 | SAMN02927928_1457 | SAMN02927928_1391 | NTE family protein. | Polyhydroxyalkanoate synthesis repressor PhaR. | 0.461 |
SCW47086.1 | SCW75540.1 | SAMN02927928_1457 | SAMN02927928_3178 | NTE family protein. | Polyhydroxyalkanoate synthase. | 0.672 |
SCW47086.1 | SCW85112.1 | SAMN02927928_1457 | SAMN02927928_0204 | NTE family protein. | Poly(3-hydroxybutyrate) depolymerase. | 0.547 |
SCW66455.1 | SCW41239.1 | SAMN02927928_2528 | SAMN02927928_1033 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 3-hydroxybutyryl-CoA dehydratase. | 0.964 |
SCW66455.1 | SCW46074.1 | SAMN02927928_2528 | SAMN02927928_1389 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.708 |
SCW66455.1 | SCW66816.1 | SAMN02927928_2528 | SAMN02927928_2557 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.708 |
SCW66455.1 | SCW75540.1 | SAMN02927928_2528 | SAMN02927928_3178 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Polyhydroxyalkanoate synthase. | 0.926 |
SCW66455.1 | SCW75546.1 | SAMN02927928_2528 | SAMN02927928_3179 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Phosphotransacetylase. | 0.763 |
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