STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW75540.1Polyhydroxyalkanoate synthase. (581 aa)    
Predicted Functional Partners:
SCW85112.1
Poly(3-hydroxybutyrate) depolymerase.
 
  
 0.972
SCW75546.1
Phosphotransacetylase.
 
 0.970
SCW41239.1
3-hydroxybutyryl-CoA dehydratase.
 
  
 0.936
SCW66455.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
     
 0.926
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 0.919
SCW46102.1
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.814
SCW75559.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
 
    0.812
SCW46074.1
3-oxoacyl-[acyl-carrier-protein] reductase.
  
 
  0.788
SCW47086.1
NTE family protein.
 
   
 0.672
SCW66816.1
3-oxoacyl-[acyl-carrier protein] reductase.
   
 
  0.585
Your Current Organism:
Asticcacaulis taihuensis
NCBI taxonomy Id: 260084
Other names: A. taihuensis, AS 1.3431, Asticcacaulis sp. T3-B7, Asticcacaulis taihuensis Liu et al. 2005, JCM 12463, strain T3-B7
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