STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM56640.1Acyl-coenzyme A thioesterase PaaI, contains HGG motif. (197 aa)    
Predicted Functional Partners:
htpX
Heat shock protein. Metallo peptidase. MEROPS family M48B; Belongs to the peptidase M48B family.
       0.731
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
    0.717
SFO16860.1
Ferredoxin-NADP reductase.
  
 
 0.593
SFO23222.1
Hypothetical protein; Belongs to the cytochrome P450 family.
  
 
  0.592
SFM56656.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.591
SFM86603.1
Vanillate O-demethylase ferredoxin subunit.
  
 
  0.587
SFN56248.1
Ferredoxin-NADP reductase.
  
 
  0.587
SFN53894.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
  0.587
SFO06845.1
Ferredoxin-NADP reductase.
  
 
  0.587
SFO29187.1
Ferredoxin-NADP reductase.
  
 
  0.587
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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