STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM97018.1Uncharacterized membrane protein, YccA/Bax inhibitor family. (266 aa)    
Predicted Functional Partners:
SFM94991.1
Hypothetical protein.
  
    0.505
SFN12394.1
Sporulation and spore germination.
  
     0.491
SFN01922.1
Protein of unknown function.
  
     0.487
SFM97044.1
Hypothetical protein.
       0.473
SFO12320.1
Protein of unknown function.
  
     0.471
SFM96995.1
Hypothetical protein.
       0.459
SFN55686.1
Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family.
   
    0.457
SFO18627.1
Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family.
   
    0.457
SFO49032.1
Pyruvate dehydrogenase (quinone).
   
    0.457
SFM90203.1
Protein of unknown function.
  
     0.425
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.