STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN08110.1Two component transcriptional regulator, LytTR family. (351 aa)    
Predicted Functional Partners:
SFM94007.1
Two-component system, LytT family, sensor kinase.
 
 0.946
SFN17392.1
Two-component system, LytT family, sensor kinase.
 
 0.946
SFM93850.1
Glutamate-5-semialdehyde dehydrogenase.
    
   0.835
SFM55682.1
Signal transduction histidine kinase.
 
  
 0.743
SFN17306.1
Sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.711
SFO32061.1
PAS domain S-box-containing protein.
    
 0.692
SFN17341.1
Hypothetical protein.
 
     0.670
SFN45679.1
Protein of unknown function.
  
 0.609
SFM94076.1
Sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.564
SFN08124.1
Hypothetical protein.
       0.533
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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