STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN10175.1Hypothetical protein. (595 aa)    
Predicted Functional Partners:
SFN92009.1
Type VII secretion-associated protein, Rv3446c family, C-terminal domain-containing protein.
  
     0.747
SFN17068.1
Hypothetical protein.
 
     0.728
SFN17416.1
Hypothetical protein.
  
     0.726
SFN91331.1
Hypothetical protein.
  
     0.722
SFO30638.1
SurA N-terminal domain-containing protein.
  
     0.721
SFN21626.1
Hypothetical protein.
  
     0.719
SFN21582.1
EspG family protein.
  
     0.718
SFM77263.1
Hypothetical protein.
  
     0.710
SFN21246.1
Hypothetical protein.
  
     0.706
SFO22291.1
Hypothetical protein.
  
     0.704
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.