STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN15706.1Hypothetical protein. (205 aa)    
Predicted Functional Partners:
SFN15780.1
ABC-2 type transport system permease protein.
 
     0.957
SFN15739.1
Winged helix DNA-binding domain-containing protein.
 
     0.939
SFN15760.1
ABC-2 type transport system ATP-binding protein.
 
     0.905
SFN70474.1
Hypothetical protein.
  
     0.588
SFM99810.1
Hypothetical protein.
  
     0.525
SFN90261.1
Hypothetical protein.
  
     0.520
SFM94511.1
Hypothetical protein.
  
     0.516
SFN00269.1
Serine/threonine protein kinase.
  
     0.514
SFO60807.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
  
     0.512
SFN15687.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
       0.490
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.