STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN20609.1Anion-transporting ATPase, ArsA/GET3 family. (324 aa)    
Predicted Functional Partners:
SFN20600.1
Arsenite efflux ATP-binding protein ArsA.
 
 
 
 0.999
SFN58884.1
Orotidine-5'-phosphate decarboxylase.
    
 
 0.841
SFM58673.1
Putative sensory transduction regulator.
  
     0.756
SFO02761.1
Helix-turn-helix.
  
     0.738
SFN82047.1
Ribosome association toxin PasT (RatA) of the RatAB toxin-antitoxin module.
 
     0.737
SFM57921.1
UDP-glucose 4-epimerase.
  
     0.728
SFM57899.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.726
SFN22251.1
Hypothetical protein.
  
     0.661
SFN02133.1
Helix-turn-helix domain-containing protein.
  
     0.659
SFN06313.1
Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif.
  
   0.643
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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