Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFM89456.1 | SFN07091.1 | SAMN05216207_1004149 | SAMN05216207_1007106 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.537 |
| SFM89456.1 | SFN26352.1 | SAMN05216207_1004149 | SAMN05216207_1011108 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Transcriptional regulator, XRE family with cupin sensor. | 0.598 |
| SFM89456.1 | SFO48559.1 | SAMN05216207_1004149 | SAMN05216207_106711 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Rifamycin polyketide synthase modules 1, 2 and 3. | 0.684 |
| SFM89456.1 | nadE | SAMN05216207_1004149 | SAMN05216207_1008169 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.833 |
| SFN06582.1 | SFN07091.1 | SAMN05216207_100783 | SAMN05216207_1007106 | 4-carboxymuconolactone decarboxylase. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.584 |
| SFN06582.1 | SFN26352.1 | SAMN05216207_100783 | SAMN05216207_1011108 | 4-carboxymuconolactone decarboxylase. | Transcriptional regulator, XRE family with cupin sensor. | 0.568 |
| SFN06582.1 | SFN95319.1 | SAMN05216207_100783 | SAMN05216207_102567 | 4-carboxymuconolactone decarboxylase. | 3-oxoadipate enol-lactonase. | 0.992 |
| SFN06582.1 | SFO48559.1 | SAMN05216207_100783 | SAMN05216207_106711 | 4-carboxymuconolactone decarboxylase. | Rifamycin polyketide synthase modules 1, 2 and 3. | 0.879 |
| SFN07091.1 | SFM89456.1 | SAMN05216207_1007106 | SAMN05216207_1004149 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.537 |
| SFN07091.1 | SFN06582.1 | SAMN05216207_1007106 | SAMN05216207_100783 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 4-carboxymuconolactone decarboxylase. | 0.584 |
| SFN07091.1 | SFN26352.1 | SAMN05216207_1007106 | SAMN05216207_1011108 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Transcriptional regulator, XRE family with cupin sensor. | 0.665 |
| SFN07091.1 | SFN64534.1 | SAMN05216207_1007106 | SAMN05216207_101886 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.546 |
| SFN07091.1 | SFN95319.1 | SAMN05216207_1007106 | SAMN05216207_102567 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 3-oxoadipate enol-lactonase. | 0.584 |
| SFN07091.1 | SFO48559.1 | SAMN05216207_1007106 | SAMN05216207_106711 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Rifamycin polyketide synthase modules 1, 2 and 3. | 0.526 |
| SFN07091.1 | nadE | SAMN05216207_1007106 | SAMN05216207_1008169 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.968 |
| SFN26352.1 | SFM89456.1 | SAMN05216207_1011108 | SAMN05216207_1004149 | Transcriptional regulator, XRE family with cupin sensor. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.598 |
| SFN26352.1 | SFN06582.1 | SAMN05216207_1011108 | SAMN05216207_100783 | Transcriptional regulator, XRE family with cupin sensor. | 4-carboxymuconolactone decarboxylase. | 0.568 |
| SFN26352.1 | SFN07091.1 | SAMN05216207_1011108 | SAMN05216207_1007106 | Transcriptional regulator, XRE family with cupin sensor. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.665 |
| SFN26352.1 | SFN26373.1 | SAMN05216207_1011108 | SAMN05216207_1011109 | Transcriptional regulator, XRE family with cupin sensor. | NADH oxidase (H2O2-forming). | 0.566 |
| SFN26352.1 | SFN26394.1 | SAMN05216207_1011108 | SAMN05216207_1011110 | Transcriptional regulator, XRE family with cupin sensor. | Hypothetical protein. | 0.536 |
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