STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN50282.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (253 aa)    
Predicted Functional Partners:
SFM77287.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.941
SFO48559.1
Rifamycin polyketide synthase modules 1, 2 and 3.
  
 0.924
fabH
3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
  
 
 0.899
SFN07527.1
3-oxoacyl-(acyl-carrier-protein) synthase III.
  
 
 0.812
SFN50304.1
Acetamidase/formamidase.
 
    0.801
SFN98628.1
1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase.
  
0.754
SFO23222.1
Hypothetical protein; Belongs to the cytochrome P450 family.
  
 0.720
SFM90448.1
Short-chain dehydrogenase.
  
 
  0.718
SFM60244.1
(-)-trans-carveol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.701
SFN94696.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
  
 
 0.671
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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