Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN57960.1 | SFN57997.1 | SAMN05216207_10172 | SAMN05216207_10174 | Transketolase; Belongs to the transketolase family. | Hypothetical protein. | 0.994 |
SFN57960.1 | SFN58294.1 | SAMN05216207_10172 | SAMN05216207_101717 | Transketolase; Belongs to the transketolase family. | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.984 |
SFN57960.1 | SFN64243.1 | SAMN05216207_10172 | SAMN05216207_101876 | Transketolase; Belongs to the transketolase family. | Triosephosphate isomerase. | 0.917 |
SFN57960.1 | SFN69529.1 | SAMN05216207_10172 | SAMN05216207_101969 | Transketolase; Belongs to the transketolase family. | Fructose-bisphosphate aldolase. | 0.890 |
SFN57960.1 | SFO11842.1 | SAMN05216207_10172 | SAMN05216207_103133 | Transketolase; Belongs to the transketolase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.983 |
SFN57960.1 | eno | SAMN05216207_10172 | SAMN05216207_104317 | Transketolase; Belongs to the transketolase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.985 |
SFN57960.1 | pfkA | SAMN05216207_10172 | SAMN05216207_1001505 | Transketolase; Belongs to the transketolase family. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily. | 0.950 |
SFN57960.1 | pgi | SAMN05216207_10172 | SAMN05216207_101513 | Transketolase; Belongs to the transketolase family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.992 |
SFN57960.1 | tal | SAMN05216207_10172 | SAMN05216207_10173 | Transketolase; Belongs to the transketolase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.999 |
SFN57960.1 | tpiA | SAMN05216207_10172 | SAMN05216207_101715 | Transketolase; Belongs to the transketolase family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.975 |
SFN57997.1 | SFN57960.1 | SAMN05216207_10174 | SAMN05216207_10172 | Hypothetical protein. | Transketolase; Belongs to the transketolase family. | 0.994 |
SFN57997.1 | SFN58294.1 | SAMN05216207_10174 | SAMN05216207_101717 | Hypothetical protein. | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.970 |
SFN57997.1 | SFN64243.1 | SAMN05216207_10174 | SAMN05216207_101876 | Hypothetical protein. | Triosephosphate isomerase. | 0.958 |
SFN57997.1 | SFN69529.1 | SAMN05216207_10174 | SAMN05216207_101969 | Hypothetical protein. | Fructose-bisphosphate aldolase. | 0.954 |
SFN57997.1 | SFO11842.1 | SAMN05216207_10174 | SAMN05216207_103133 | Hypothetical protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.987 |
SFN57997.1 | eno | SAMN05216207_10174 | SAMN05216207_104317 | Hypothetical protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.987 |
SFN57997.1 | pfkA | SAMN05216207_10174 | SAMN05216207_1001505 | Hypothetical protein. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily. | 0.986 |
SFN57997.1 | tal | SAMN05216207_10174 | SAMN05216207_10173 | Hypothetical protein. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.995 |
SFN57997.1 | tpiA | SAMN05216207_10174 | SAMN05216207_101715 | Hypothetical protein. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.986 |
SFN58294.1 | SFN57960.1 | SAMN05216207_101717 | SAMN05216207_10172 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Transketolase; Belongs to the transketolase family. | 0.984 |
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