STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN78497.1acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein. (630 aa)    
Predicted Functional Partners:
SFN94696.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
 0.998
SFN26911.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
0.997
SFM83023.1
Biotin-requiring enzyme.
 
 0.994
SFN78474.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 0.991
SFM65489.1
3-methylcrotonyl-CoA carboxylase beta subunit.
 
 0.978
SFN07836.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 0.978
SFN11398.1
propionyl-CoA carboxylase beta chain.
 
 0.978
SFN07508.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
 
0.977
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
  0.976
SFN11419.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
 
  
 0.964
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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