STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN92031.1DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. (1421 aa)    
Predicted Functional Partners:
SFN92099.1
Type VII secretion protein EccB.
 
 
 0.997
SFN92055.1
Type VII secretion integral membrane protein EccD.
 
 
 0.996
SFN91980.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
 
 
 
 0.992
SFN92081.1
Membrane-anchored mycosin MYCP.
 
 
 0.979
SFN91958.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
 
 
 
 0.973
SFM58894.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
 
 0.952
SFN92009.1
Type VII secretion-associated protein, Rv3446c family, C-terminal domain-containing protein.
  
  
 0.820
SFN83309.1
Cell division protein FtsQ; Essential cell division protein.
   
 
 0.752
SFN49827.1
Protein of unknown function.
  
 
   0.526
SFO41568.1
Protein of unknown function.
  
 
   0.522
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.