STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO01644.1S-(hydroxymethyl)mycothiol dehydrogenase. (362 aa)    
Predicted Functional Partners:
SFO01673.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.905
SFN98882.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
  
 
 0.803
SFM61182.1
Methanol dehydrogenase (acceptor) apoprotein.
    
 0.794
SFN73112.1
Alcohol dehydrogenase, propanol-preferring.
  
 
0.776
SFN17602.1
NAD+-dependent secondary alcohol dehydrogenase Adh1.
  
 
0.744
SFO48559.1
Rifamycin polyketide synthase modules 1, 2 and 3.
  
 
 0.719
SFN05865.1
S-formylglutathione hydrolase FrmB.
  
 0.714
SFM57342.1
Alcohol dehydrogenase, class IV.
    
 0.697
SFM62424.1
Alcohol dehydrogenase, class IV.
    
 0.697
SFO27759.1
Putative esterase.
  
 0.675
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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