STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO08977.1Glycosyl transferase family 2. (296 aa)    
Predicted Functional Partners:
SFN86639.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.766
SFN54792.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
  
 0.642
SFO52428.1
Nucleoside-diphosphate-sugar epimerase.
 
 
  0.640
SFO52455.1
Glucose-1-phosphate cytidylyltransferase.
 
 0.610
SFN87143.1
Glucose-1-phosphate cytidylyltransferase.
 
 0.594
SFM84221.1
Undecaprenyl-diphosphatase.
    
 0.570
SFN07069.1
Glycosyltransferase like family 2.
 
 
  0.490
SFO00859.1
Glycosyl transferase family 2.
 
 
  0.490
SFO23222.1
Hypothetical protein; Belongs to the cytochrome P450 family.
    
  0.484
SFN22218.1
C-methyltransferase C-terminal domain-containing protein.
 
     0.448
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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