STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO22170.1FAD/FMN-containing dehydrogenase. (463 aa)    
Predicted Functional Partners:
SFM87554.1
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
    
 0.853
SFM84365.1
NADH-quinone oxidoreductase subunit F.
   
   0.848
SFN16737.1
Decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
    
 0.749
SFO22189.1
Transcriptional activator domain-containing protein.
 
     0.674
SFO07434.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.661
SFN64534.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.634
SFO22153.1
3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
       0.628
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
     
 0.624
SFM56675.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.612
SFN98628.1
1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase.
  
 0.601
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.