STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO23202.1butyryl-CoA dehydrogenase. (419 aa)    
Predicted Functional Partners:
SFM69550.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.856
SFO33101.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.837
SFO33120.1
Electron transfer flavoprotein beta subunit.
 
 
 0.835
SFO01519.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.825
SFO48559.1
Rifamycin polyketide synthase modules 1, 2 and 3.
  
 0.800
SFM69579.1
Electron transfer flavoprotein beta subunit.
 
 
 0.769
SFN72896.1
acyl-CoA dehydrogenase.
  
     0.758
SFO55948.1
Acyl-CoA dehydrogenase.
  
     0.756
SFN68673.1
Acyl-CoA dehydrogenase.
  
     0.745
SFM93156.1
Acyl-CoA dehydrogenase.
  
     0.740
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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