STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO31416.1Isoquinoline 1-oxidoreductase, beta subunit. (781 aa)    
Predicted Functional Partners:
SFO31435.1
Isoquinoline 1-oxidoreductase, alpha subunit.
  0.974
SFN96162.1
Isoquinoline 1-oxidoreductase, alpha subunit.
  0.908
SFO42052.1
Isoquinoline 1-oxidoreductase, alpha subunit.
  0.889
SFN54399.1
Isoquinoline 1-oxidoreductase, alpha subunit.
  0.885
SFN05532.1
Carbon-monoxide dehydrogenase medium subunit.
  
 0.876
SFN94417.1
Carbon-monoxide dehydrogenase medium subunit.
  
 0.876
SFO37173.1
Carbon-monoxide dehydrogenase medium subunit.
  
 0.876
SFO48424.1
Carbon-monoxide dehydrogenase medium subunit.
  
 0.876
SFN05491.1
Carbon-monoxide dehydrogenase small subunit.
  
  0.827
SFN94445.1
Carbon-monoxide dehydrogenase small subunit.
 
  0.827
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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