STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO32453.1Lysophospholipase L1. (420 aa)    
Predicted Functional Partners:
SFM97551.1
Hypothetical protein.
  
 0.840
SFN12572.1
MT0933-like antitoxin protein.
  
 0.840
SFN22397.1
MT0933-like antitoxin protein.
  
 0.840
SFM82138.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
 0.815
SFN08010.1
Carboxymethylenebutenolidase.
  
  
  0.524
SFO32466.1
Hypothetical protein.
       0.476
SFN92099.1
Type VII secretion protein EccB.
  
 
  0.459
SFO07112.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.458
SFN16084.1
Arabinosyltransferase B/arabinosyltransferase C.
  
 
  0.456
SFN90261.1
Hypothetical protein.
  
 
  0.441
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.