STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO33160.1Methyltransferase domain-containing protein. (247 aa)    
Predicted Functional Partners:
SFO33178.1
1,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 57 family.
 
  
 0.969
SFM73766.1
Hypothetical protein.
   
   0.929
SFO33197.1
(1->4)-alpha-D-glucan synthase (UDP-glucose).
 
   
 0.872
SFO34669.1
GDSL-like Lipase/Acylhydrolase family protein.
 
   
 0.830
SFO33359.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
 
 
  0.778
SFO33220.1
Acetyltransferase (isoleucine patch superfamily).
 
   
 0.756
SFN81981.1
Hypothetical protein.
  
   
 0.732
SFO29825.1
Magnesium chelatase subunit D.
  
 0.719
SFM69603.1
Dimethylglycine oxidase; Belongs to the GcvT family.
   
  0.679
SFM71285.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
   
  0.679
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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