STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO43032.1Cytochrome c-type biogenesis protein CcsB. (329 aa)    
Predicted Functional Partners:
SFO45406.1
Heme exporter protein B.
  
 0.991
SFO43016.1
Cytochrome c biogenesis protein.
 
  
 0.989
SFO45452.1
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
  
 
 0.981
SFO45395.1
Heme exporter protein A.
  
 0.978
SFO43002.1
Cytochrome c-type biogenesis protein.
 
  
 0.958
SFO42982.1
Thiol-disulfide isomerase or thioredoxin.
  
  
 0.956
SFM57548.1
Cytochrome c biogenesis protein.
 
  
 0.953
SFM57692.1
Uroporphyrinogen III methyltransferase / synthase.
 
    0.842
SFM57569.1
Cytochrome c-type biogenesis protein.
 
  
 0.823
SFO45379.1
Cytochrome c-type biogenesis protein.
  
  
 0.793
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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