STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO51542.1Probable F420-dependent oxidoreductase, MSMEG_2256 family. (348 aa)    
Predicted Functional Partners:
SFO51671.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
 
     0.807
SFN54188.1
Probable F420-dependent oxidoreductase, MSMEG_2516 family.
  
     0.755
SFM89759.1
Probable F420-dependent oxidoreductase, Rv2161c family.
  
     0.750
SFN12019.1
LPPG:FO 2-phospho-L-lactate transferase.
 
   
 0.744
SFN12037.1
Coenzyme F420-0 gamma-glutamyl ligase.
 
  
 0.739
SFN49298.1
5,10-methylenetetrahydromethanopterin reductase.
  
     0.737
SFN94755.1
F420-dependent oxidoreductase, G6PDH family.
  
     0.726
SFN25984.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.682
SFN75114.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.650
SFM61666.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
   
 0.638
Your Current Organism:
Pseudonocardia ammonioxydans
NCBI taxonomy Id: 260086
Other names: CIP 109186, DSM 44958, JCM 12462, P. ammonioxydans, Pseudonocardia ammonioxydans Liu et al. 2006, Pseudonocardia sp. H9, strain H9
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