Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AQQ66779.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa)    
Predicted Functional Partners:
AQQ66777.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.856
AQQ66778.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.817
AQQ67704.1
CbbBc protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.742
AQQ68023.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.732
AQQ67134.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.677
AQQ67083.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome c-552 family.
  
 
 0.674
AQQ68150.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.611
AQQ66852.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.511
AQQ66780.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.506
AQQ68291.1
Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.494
Your Current Organism:
Microbulbifer agarilyticus
NCBI taxonomy Id: 260552
Other names: DSM 19200, JCM 14708, M. agarilyticus, Microbulbifer agarilyticus Miyazaki et al. 2008, Microbulbifer sp. JAMB-A3, Microbulbifer sp. JAMM 0654, Microbulbifer sp. JAMM 0793, strain JAMB A3
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