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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ67084.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (676 aa)    
Predicted Functional Partners:
AQQ66852.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 0.997
AQQ66853.1
Nitrite reductase (NAD(P)H) small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.991
AQQ67063.1
Nitrate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.948
AQQ66855.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.934
AQQ66854.1
Nitrite reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 
0.929
AQQ67062.1
Nitrate reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.929
AQQ67058.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.917
AQQ67060.1
Respiratory nitrate reductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.917
AQQ67525.1
NAD-glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.904
AQQ67724.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.
    
 0.904
Your Current Organism:
Microbulbifer agarilyticus
NCBI taxonomy Id: 260552
Other names: DSM 19200, JCM 14708, M. agarilyticus, Microbulbifer agarilyticus Miyazaki et al. 2008, Microbulbifer sp. JAMB-A3, Microbulbifer sp. JAMM 0654, Microbulbifer sp. JAMM 0793, strain JAMB A3
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