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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ67270.1C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (464 aa)    
Predicted Functional Partners:
ddpX
Hypothetical protein; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
 
     0.626
AQQ67271.1
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.565
AQQ67273.1
DUF5009 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.565
AQQ66814.1
Sodium-dependent transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.488
AQQ67887.1
Sodium:proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.488
AQQ68333.1
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.486
AQQ67269.1
LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.478
AQQ66812.1
Sodium-dependent transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.477
AQQ67277.1
Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.477
AQQ69422.1
FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.447
Your Current Organism:
Microbulbifer agarilyticus
NCBI taxonomy Id: 260552
Other names: DSM 19200, JCM 14708, M. agarilyticus, Microbulbifer agarilyticus Miyazaki et al. 2008, Microbulbifer sp. JAMB-A3, Microbulbifer sp. JAMM 0654, Microbulbifer sp. JAMM 0793, strain JAMB A3
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