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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ69441.1UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)    
Predicted Functional Partners:
AQQ67507.1
UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
AQQ67505.1
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.963
AQQ67508.1
Pseudaminic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.951
AQQ67504.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.919
AQQ67506.1
Pseudaminic acid cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.896
AQQ67509.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.778
AQQ67510.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.550
AQQ67511.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.537
AQQ68723.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.522
AQQ67514.1
Teichuronic acid biosynthesis glycosyl transferase tuaG; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.446
Your Current Organism:
Microbulbifer agarilyticus
NCBI taxonomy Id: 260552
Other names: DSM 19200, JCM 14708, M. agarilyticus, Microbulbifer agarilyticus Miyazaki et al. 2008, Microbulbifer sp. JAMB-A3, Microbulbifer sp. JAMM 0654, Microbulbifer sp. JAMM 0793, strain JAMB A3
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