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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ67765.1Sulfurtransferase TusC; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)    
Predicted Functional Partners:
AQQ67764.1
Sulfurtransferase TusD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
AQQ67766.1
Sulfur relay protein DsrH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
AQQ67767.1
Sulfurtransferase TusE; Part of a sulfur-relay system.
 
 
 0.981
AQQ67768.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.642
AQQ67763.1
BAX inhibitor protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.
       0.572
AQQ67743.1
Nucleic acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.477
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.437
AQQ66787.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.415
rdgC
Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family.
  
     0.404
AQQ67354.1
C-type cytochrome biogenesis protein CcmI; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.402
Your Current Organism:
Microbulbifer agarilyticus
NCBI taxonomy Id: 260552
Other names: DSM 19200, JCM 14708, M. agarilyticus, Microbulbifer agarilyticus Miyazaki et al. 2008, Microbulbifer sp. JAMB-A3, Microbulbifer sp. JAMM 0654, Microbulbifer sp. JAMM 0793, strain JAMB A3
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