Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AU385_00340 | AU385_00345 | AU385_00340 | AU385_00345 | Uncharacterized protein. | Uncharacterized protein. | 0.781 |
AU385_00340 | AU385_00350 | AU385_00340 | AU385_00350 | Uncharacterized protein. | Uncharacterized protein. | 0.773 |
AU385_00340 | AU385_00355 | AU385_00340 | AU385_00355 | Uncharacterized protein. | Amidohydrolase. | 0.515 |
AU385_00340 | AU385_00360 | AU385_00340 | AU385_00360 | Uncharacterized protein. | P-aminobenzoyl-glutamate transporter. | 0.474 |
AU385_00345 | AU385_00340 | AU385_00345 | AU385_00340 | Uncharacterized protein. | Uncharacterized protein. | 0.781 |
AU385_00345 | AU385_00350 | AU385_00345 | AU385_00350 | Uncharacterized protein. | Uncharacterized protein. | 0.773 |
AU385_00345 | AU385_00355 | AU385_00345 | AU385_00355 | Uncharacterized protein. | Amidohydrolase. | 0.515 |
AU385_00345 | AU385_00360 | AU385_00345 | AU385_00360 | Uncharacterized protein. | P-aminobenzoyl-glutamate transporter. | 0.474 |
AU385_00350 | AU385_00340 | AU385_00350 | AU385_00340 | Uncharacterized protein. | Uncharacterized protein. | 0.773 |
AU385_00350 | AU385_00345 | AU385_00350 | AU385_00345 | Uncharacterized protein. | Uncharacterized protein. | 0.773 |
AU385_00350 | AU385_00355 | AU385_00350 | AU385_00355 | Uncharacterized protein. | Amidohydrolase. | 0.515 |
AU385_00350 | AU385_00360 | AU385_00350 | AU385_00360 | Uncharacterized protein. | P-aminobenzoyl-glutamate transporter. | 0.474 |
AU385_00355 | AU385_00340 | AU385_00355 | AU385_00340 | Amidohydrolase. | Uncharacterized protein. | 0.515 |
AU385_00355 | AU385_00345 | AU385_00355 | AU385_00345 | Amidohydrolase. | Uncharacterized protein. | 0.515 |
AU385_00355 | AU385_00350 | AU385_00355 | AU385_00350 | Amidohydrolase. | Uncharacterized protein. | 0.515 |
AU385_00355 | AU385_00360 | AU385_00355 | AU385_00360 | Amidohydrolase. | P-aminobenzoyl-glutamate transporter. | 0.825 |
AU385_00355 | AU385_00365 | AU385_00355 | AU385_00365 | Amidohydrolase. | Amidohydrolase. | 0.702 |
AU385_00355 | dapD | AU385_00355 | AU385_09595 | Amidohydrolase. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | 0.401 |
AU385_00360 | AU385_00340 | AU385_00360 | AU385_00340 | P-aminobenzoyl-glutamate transporter. | Uncharacterized protein. | 0.474 |
AU385_00360 | AU385_00345 | AU385_00360 | AU385_00345 | P-aminobenzoyl-glutamate transporter. | Uncharacterized protein. | 0.474 |
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