Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AU385_04320 | lipL | AU385_04320 | AU385_04325 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Octanoyl-[GcvH]:protein N-octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family. | 0.718 |
AU385_06460 | AU385_14580 | AU385_06460 | AU385_14580 | Carboxylesterase. | CvpA family protein. | 0.441 |
AU385_06460 | AU385_19435 | AU385_06460 | AU385_19435 | Carboxylesterase. | Fe-S_biosyn domain-containing protein; Belongs to the HesB/IscA family. | 0.552 |
AU385_06460 | AU385_20345 | AU385_06460 | AU385_20345 | Carboxylesterase. | UPF0354 protein C7B72_03355; Belongs to the UPF0354 family. | 0.483 |
AU385_06460 | lipL | AU385_06460 | AU385_04325 | Carboxylesterase. | Octanoyl-[GcvH]:protein N-octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family. | 0.725 |
AU385_09390 | AU385_11670 | AU385_09390 | AU385_11670 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Lipoate--protein ligase. | 0.716 |
AU385_09390 | AU385_19435 | AU385_09390 | AU385_19435 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Fe-S_biosyn domain-containing protein; Belongs to the HesB/IscA family. | 0.409 |
AU385_09390 | gcvH | AU385_09390 | AU385_06910 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Glycine cleavage system H protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family. | 0.542 |
AU385_09390 | lipL | AU385_09390 | AU385_04325 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Octanoyl-[GcvH]:protein N-octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family. | 0.643 |
AU385_09390 | lipM | AU385_09390 | AU385_16155 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Octanoyltransferase LipM; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation. | 0.438 |
AU385_11670 | AU385_09390 | AU385_11670 | AU385_09390 | Lipoate--protein ligase. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.716 |
AU385_11670 | gcvH | AU385_11670 | AU385_06910 | Lipoate--protein ligase. | Glycine cleavage system H protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family. | 0.885 |
AU385_11670 | lipA | AU385_11670 | AU385_07145 | Lipoate--protein ligase. | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.987 |
AU385_11670 | lipL | AU385_11670 | AU385_04325 | Lipoate--protein ligase. | Octanoyl-[GcvH]:protein N-octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family. | 0.932 |
AU385_14580 | AU385_06460 | AU385_14580 | AU385_06460 | CvpA family protein. | Carboxylesterase. | 0.441 |
AU385_14580 | AU385_20345 | AU385_14580 | AU385_20345 | CvpA family protein. | UPF0354 protein C7B72_03355; Belongs to the UPF0354 family. | 0.465 |
AU385_14580 | lipL | AU385_14580 | AU385_04325 | CvpA family protein. | Octanoyl-[GcvH]:protein N-octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family. | 0.648 |
AU385_19435 | AU385_06460 | AU385_19435 | AU385_06460 | Fe-S_biosyn domain-containing protein; Belongs to the HesB/IscA family. | Carboxylesterase. | 0.552 |
AU385_19435 | AU385_09390 | AU385_19435 | AU385_09390 | Fe-S_biosyn domain-containing protein; Belongs to the HesB/IscA family. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.409 |
AU385_19435 | lipL | AU385_19435 | AU385_04325 | Fe-S_biosyn domain-containing protein; Belongs to the HesB/IscA family. | Octanoyl-[GcvH]:protein N-octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family. | 0.770 |
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