Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AU385_07085 | AU385_07090 | AU385_07085 | AU385_07090 | Uricase. | Xanthine permease. | 0.917 |
AU385_07085 | AU385_07095 | AU385_07085 | AU385_07095 | Uricase. | Uric acid permease PucJ. | 0.923 |
AU385_07085 | AU385_07100 | AU385_07085 | AU385_07100 | Uricase. | PucR family transcriptional regulator. | 0.745 |
AU385_07085 | allB | AU385_07085 | AU385_07105 | Uricase. | Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family. | 0.983 |
AU385_07085 | uraH | AU385_07085 | AU385_07080 | Uricase. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.985 |
AU385_07090 | AU385_07085 | AU385_07090 | AU385_07085 | Xanthine permease. | Uricase. | 0.917 |
AU385_07090 | AU385_07095 | AU385_07090 | AU385_07095 | Xanthine permease. | Uric acid permease PucJ. | 0.849 |
AU385_07090 | AU385_07100 | AU385_07090 | AU385_07100 | Xanthine permease. | PucR family transcriptional regulator. | 0.599 |
AU385_07090 | allB | AU385_07090 | AU385_07105 | Xanthine permease. | Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family. | 0.693 |
AU385_07090 | pyrB | AU385_07090 | AU385_08955 | Xanthine permease. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.684 |
AU385_07090 | pyrE | AU385_07090 | AU385_08920 | Xanthine permease. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.633 |
AU385_07090 | pyrF | AU385_07090 | AU385_08925 | Xanthine permease. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.645 |
AU385_07090 | pyrR | AU385_07090 | AU385_08965 | Xanthine permease. | Pyrimidine operon regulatory protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.684 |
AU385_07090 | uraH | AU385_07090 | AU385_07080 | Xanthine permease. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.873 |
AU385_07090 | xpt | AU385_07090 | AU385_17380 | Xanthine permease. | Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.851 |
AU385_07095 | AU385_07085 | AU385_07095 | AU385_07085 | Uric acid permease PucJ. | Uricase. | 0.923 |
AU385_07095 | AU385_07090 | AU385_07095 | AU385_07090 | Uric acid permease PucJ. | Xanthine permease. | 0.849 |
AU385_07095 | AU385_07100 | AU385_07095 | AU385_07100 | Uric acid permease PucJ. | PucR family transcriptional regulator. | 0.681 |
AU385_07095 | allB | AU385_07095 | AU385_07105 | Uric acid permease PucJ. | Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family. | 0.725 |
AU385_07095 | pyrB | AU385_07095 | AU385_08955 | Uric acid permease PucJ. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.684 |
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