Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AU385_09215 | AU385_10880 | AU385_09215 | AU385_10880 | Uncharacterized protein. | Sporulation protein. | 0.620 |
AU385_09215 | AU385_14010 | AU385_09215 | AU385_14010 | Uncharacterized protein. | Uncharacterized protein. | 0.664 |
AU385_09215 | AU385_14905 | AU385_09215 | AU385_14905 | Uncharacterized protein. | M23 family peptidase. | 0.617 |
AU385_09215 | AU385_15020 | AU385_09215 | AU385_15020 | Uncharacterized protein. | Signaling peptide protein. | 0.761 |
AU385_09215 | AU385_15865 | AU385_09215 | AU385_15865 | Uncharacterized protein. | DUF2624 domain-containing protein. | 0.591 |
AU385_09215 | ysxE | AU385_09215 | AU385_14840 | Uncharacterized protein. | Spore coat protein YsxE. | 0.758 |
AU385_09215 | yutH | AU385_09215 | AU385_07175 | Uncharacterized protein. | Spore coat protein YutH. | 0.772 |
AU385_09305 | AU385_10880 | AU385_09305 | AU385_10880 | YhcN/YlaJ family sporulation lipoprotein. | Sporulation protein. | 0.708 |
AU385_09305 | AU385_14010 | AU385_09305 | AU385_14010 | YhcN/YlaJ family sporulation lipoprotein. | Uncharacterized protein. | 0.549 |
AU385_09305 | AU385_14845 | AU385_09305 | AU385_14845 | YhcN/YlaJ family sporulation lipoprotein. | Uncharacterized protein. | 0.515 |
AU385_09305 | AU385_14905 | AU385_09305 | AU385_14905 | YhcN/YlaJ family sporulation lipoprotein. | M23 family peptidase. | 0.603 |
AU385_09305 | AU385_15865 | AU385_09305 | AU385_15865 | YhcN/YlaJ family sporulation lipoprotein. | DUF2624 domain-containing protein. | 0.639 |
AU385_09305 | AU385_17000 | AU385_09305 | AU385_17000 | YhcN/YlaJ family sporulation lipoprotein. | Uncharacterized protein. | 0.483 |
AU385_09305 | ysxE | AU385_09305 | AU385_14840 | YhcN/YlaJ family sporulation lipoprotein. | Spore coat protein YsxE. | 0.465 |
AU385_09305 | yutH | AU385_09305 | AU385_07175 | YhcN/YlaJ family sporulation lipoprotein. | Spore coat protein YutH. | 0.435 |
AU385_10880 | AU385_09215 | AU385_10880 | AU385_09215 | Sporulation protein. | Uncharacterized protein. | 0.620 |
AU385_10880 | AU385_09305 | AU385_10880 | AU385_09305 | Sporulation protein. | YhcN/YlaJ family sporulation lipoprotein. | 0.708 |
AU385_10880 | AU385_14010 | AU385_10880 | AU385_14010 | Sporulation protein. | Uncharacterized protein. | 0.623 |
AU385_10880 | AU385_14845 | AU385_10880 | AU385_14845 | Sporulation protein. | Uncharacterized protein. | 0.610 |
AU385_10880 | AU385_14905 | AU385_10880 | AU385_14905 | Sporulation protein. | M23 family peptidase. | 0.616 |
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