STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK50095.1Type ii secretion system integral membrane subunit. (269 aa)    
Predicted Functional Partners:
CRK50094.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.978
CRK50096.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.954
CRK50093.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.909
CRK50097.1
Hypothetical protein; No homology to any previously reported sequences.
     
 0.878
CRK49400.1
SAF domain-containing protein.
 
  
 0.863
CRK50098.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.837
CRK50099.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.708
CRK53817.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.685
CRK54446.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.649
CRK51878.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.622
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.