STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK49459.1Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (289 aa)    
Predicted Functional Partners:
CRK49180.1
Fatty acid synthase.
  
 
 0.795
CRK50562.1
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.765
CRK54364.1
Polyketide synthase.
  
 0.752
CRK50539.1
Non-ribosomal peptide synthetase.
  
 
 0.741
CRK49453.1
Putative Diacylglycerol O-acyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the long-chain O-acyltransferase family.
 
    0.735
CRK52819.1
Short-chain dehydrogenase/reductase SDR.
  
 
  0.725
CRK50940.1
Short-chain dehydrogenase/reductase SDR.
  
 
  0.723
fabG
3-ketoacyl-(Acyl-carrier-protein) reductase.
  
 
  0.694
bnzE
Cis-1,2-dihydrobenzene-1,2-diol dehydrogenase.
  
 
  0.693
fabG-8
3-oxoacyl-(acyl-carrier-protein) reductase FabG.
  
 
  0.691
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
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