Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRK49250.1 | CRK50027.1 | RHCRD62_10105 | RHCRD62_10882 | Alpha-glucosidase. | Amino acid permease-associated region. | 0.882 |
CRK49250.1 | glgE | RHCRD62_10105 | RHCRD62_10013 | Alpha-glucosidase. | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.559 |
CRK50026.1 | CRK50027.1 | RHCRD62_10881 | RHCRD62_10882 | Hypothetical protein; No homology to any previously reported sequences. | Amino acid permease-associated region. | 0.460 |
CRK50027.1 | CRK49250.1 | RHCRD62_10882 | RHCRD62_10105 | Amino acid permease-associated region. | Alpha-glucosidase. | 0.882 |
CRK50027.1 | CRK50026.1 | RHCRD62_10882 | RHCRD62_10881 | Amino acid permease-associated region. | Hypothetical protein; No homology to any previously reported sequences. | 0.460 |
CRK50027.1 | CRK50379.1 | RHCRD62_10882 | RHCRD62_110059 | Amino acid permease-associated region. | Shikimate 5-dehydrogenase-like protein HI_0607. | 0.452 |
CRK50027.1 | CRK54526.1 | RHCRD62_10882 | RHCRD62_90205 | Amino acid permease-associated region. | Pyridoxal dependent decarboxylase. | 0.443 |
CRK50027.1 | aroE | RHCRD62_10882 | RHCRD62_50153 | Amino acid permease-associated region. | Shikimate 5-dehydrogenase. | 0.452 |
CRK50027.1 | aroP | RHCRD62_10882 | RHCRD62_10658 | Amino acid permease-associated region. | Aromatic amino acid transport protein AroP. | 0.631 |
CRK50027.1 | glgE | RHCRD62_10882 | RHCRD62_10013 | Amino acid permease-associated region. | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.882 |
CRK50379.1 | CRK50027.1 | RHCRD62_110059 | RHCRD62_10882 | Shikimate 5-dehydrogenase-like protein HI_0607. | Amino acid permease-associated region. | 0.452 |
CRK50379.1 | aroE | RHCRD62_110059 | RHCRD62_50153 | Shikimate 5-dehydrogenase-like protein HI_0607. | Shikimate 5-dehydrogenase. | 0.903 |
CRK54526.1 | CRK50027.1 | RHCRD62_90205 | RHCRD62_10882 | Pyridoxal dependent decarboxylase. | Amino acid permease-associated region. | 0.443 |
aroE | CRK50027.1 | RHCRD62_50153 | RHCRD62_10882 | Shikimate 5-dehydrogenase. | Amino acid permease-associated region. | 0.452 |
aroE | CRK50379.1 | RHCRD62_50153 | RHCRD62_110059 | Shikimate 5-dehydrogenase. | Shikimate 5-dehydrogenase-like protein HI_0607. | 0.903 |
aroP | CRK50027.1 | RHCRD62_10658 | RHCRD62_10882 | Aromatic amino acid transport protein AroP. | Amino acid permease-associated region. | 0.631 |
glgE | CRK49250.1 | RHCRD62_10013 | RHCRD62_10105 | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | Alpha-glucosidase. | 0.559 |
glgE | CRK50027.1 | RHCRD62_10013 | RHCRD62_10882 | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | Amino acid permease-associated region. | 0.882 |