STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK50328.1S12 family peptidase. (392 aa)    
Predicted Functional Partners:
CRK50591.1
Beta-N-acetylhexosaminidase.
  
 
 0.660
CRK50582.1
Chitinase (modular protein).
    
 0.634
CRK53254.1
Putative penicillin-binding protein 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
 0.610
CRK50188.1
D-alanyl-d-alanine carboxypeptidase.
    
 0.608
CRK50853.1
Putative beta-lactamase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
   
 0.598
pbpB
Penicillin-binding protein PbpB.
     
 0.597
pbpA
Penicillin-binding protein A.
     
 0.594
CRK50373.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.540
CRK50327.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.537
CRK54178.1
Esterase.
  
     0.522
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.