STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK50371.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (177 aa)    
Predicted Functional Partners:
CRK50372.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.838
espR
Nucleoid-associated protein EspR.
       0.791
CRK50370.1
Exported hypothetical protein; No homology to any previously reported sequences.
       0.773
CRK50373.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
       0.670
sdhC
Succinate dehydrogenase cytochrome b subunit SdhC.
       0.596
CRK50365.1
Succinate dehydrogenase hydrophobic membrane anchor protein.
       0.596
sdhA
Succinate dehydrogenase, flavoprotein subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier.
       0.596
sdhB
Succinate dehydrogenase, FeS subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier.
       0.596
CRK50368.1
Hypothetical protein; No homology to any previously reported sequences.
       0.596
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.