Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRK50401.1 | CRK50539.1 | RHCRD62_110081 | RHCRD62_120060 | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | Non-ribosomal peptide synthetase. | 0.676 |
CRK50401.1 | CRK50684.1 | RHCRD62_110081 | RHCRD62_20123 | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.944 |
CRK50401.1 | cdsA | RHCRD62_110081 | RHCRD62_80192 | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.763 |
CRK50496.1 | CRK50684.1 | RHCRD62_120017 | RHCRD62_20123 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.683 |
CRK50496.1 | CRK51899.1 | RHCRD62_120017 | RHCRD62_30563 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.565 |
CRK50496.1 | CRK52220.1 | RHCRD62_120017 | RHCRD62_40107 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.614 |
CRK50496.1 | CRK53891.1 | RHCRD62_120017 | RHCRD62_70185 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.681 |
CRK50496.1 | espR | RHCRD62_120017 | RHCRD62_110049 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Nucleoid-associated protein EspR. | 0.521 |
CRK50539.1 | CRK50401.1 | RHCRD62_120060 | RHCRD62_110081 | Non-ribosomal peptide synthetase. | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | 0.676 |
CRK50539.1 | CRK50683.1 | RHCRD62_120060 | RHCRD62_20122 | Non-ribosomal peptide synthetase. | Sulfurtransferase. | 0.457 |
CRK50539.1 | CRK50684.1 | RHCRD62_120060 | RHCRD62_20123 | Non-ribosomal peptide synthetase. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.680 |
CRK50539.1 | CRK52220.1 | RHCRD62_120060 | RHCRD62_40107 | Non-ribosomal peptide synthetase. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.430 |
CRK50539.1 | cdsA | RHCRD62_120060 | RHCRD62_80192 | Non-ribosomal peptide synthetase. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.432 |
CRK50683.1 | CRK50539.1 | RHCRD62_20122 | RHCRD62_120060 | Sulfurtransferase. | Non-ribosomal peptide synthetase. | 0.457 |
CRK50683.1 | CRK50684.1 | RHCRD62_20122 | RHCRD62_20123 | Sulfurtransferase. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.689 |
CRK50684.1 | CRK50401.1 | RHCRD62_20123 | RHCRD62_110081 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | 0.944 |
CRK50684.1 | CRK50496.1 | RHCRD62_20123 | RHCRD62_120017 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.683 |
CRK50684.1 | CRK50539.1 | RHCRD62_20123 | RHCRD62_120060 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Non-ribosomal peptide synthetase. | 0.680 |
CRK50684.1 | CRK50683.1 | RHCRD62_20123 | RHCRD62_20122 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Sulfurtransferase. | 0.689 |
CRK50684.1 | CRK51899.1 | RHCRD62_20123 | RHCRD62_30563 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.710 |
page 1 of 3