STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK50770.1AzlC family protein. (212 aa)    
Predicted Functional Partners:
CRK50769.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.976
CRK50771.1
XRE family transcriptional regulator.
 
   
 0.891
CRK52786.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.750
CRK52780.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.748
CRK52605.1
Branched-chain amino acid ABC transporter transmembrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.691
CRK52055.1
Amino acid-binding protein.
    
 0.602
CRK53270.1
ABC-type branched-chain amino acid transport systems periplasmic component-like protein.
    
 0.602
CRK50772.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.560
CRK52604.1
Lipoprotein.
    
 0.482
CRK52779.1
Hypothetical protein; No homology to any previously reported sequences.
    
 0.482
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.