STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dosTHypoxia sensor histidine kinase response regulator DosT. (567 aa)    
Predicted Functional Partners:
devR
Transcriptional regulatory protein DevR (DosR).
 
 0.992
CRK52425.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 0.981
devR-2
Transcriptional regulatory protein DevR (DosR).
 
 0.968
CRK49528.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 0.938
CRK51203.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.920
CRK53523.1
Two component system sensor kinase.
   
 0.911
CRK54208.1
LuxR family transcriptional regulator.
 
 0.862
devR-3
Transcriptional regulatory protein DevR (DosR).
 
 0.861
liaR-2
Transcriptional regulatory protein LiaR.
 
 0.855
CRK49359.1
NarL family two-component response regulator.
 
 0.844
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.